BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E02LP1|AL427014
(371 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1684 498 e-141
>3x_Contig1684
Length = 14609
Score = 498 bits (251), Expect = e-141
Identities = 258/259 (99%), Gaps = 1/259 (0%)
Strand = Plus / Minus
Query: 1 gcgatttctttatacgatgatgatgttgaatactccgggataggagagacacgtaatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5807 gcgatttctttatacgatgatgatgttgaatactccgggataggagagacacgtaatcaa 5748
Query: 61 ctgaggttgcaagcgatcaaacaagcagttgaggagggtgctttgccccaatccgccttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5747 ctgaggttgcaagcgatcaaacaagcagttgaggagggtgctttgccccaatccgccttg 5688
Query: 121 cttgattatgaagctgagcagcaaagaatgcatgtcaatgattctggtagggaagatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5687 cttgattatgaagctgagcagcaaagaatgcatgtcaatgattctggtagggaagatggt 5628
Query: 181 gatgatgatgaattcaatgtaacaaaatacaattactcgttgtttcatttcattttcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5627 gatgatgatgaattcaatgtaacaaaatacaattactcgttgtttcatttcattttcttt 5568
Query: 241 ttagctaccgcaatggatt 259
||||||| |||||||||||
Sbjct: 5567 ttagcta-cgcaatggatt 5550
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3763
Number of Sequences: 1807
Number of extensions: 3763
Number of successful extensions: 132
Number of sequences better than 1.0e-20: 1
length of query: 371
length of database: 10,358,551
effective HSP length: 16
effective length of query: 355
effective length of database: 10,329,639
effective search space: 3667021845
effective search space used: 3667021845
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)